Simonsen, T. J., Wahlberg, N., Warren, A. D. & Sperling, F. A. H. (in review). The evolutionary history of Boloria (Lepidoptera: Nymphalidae): phylogeny, zoogeography and larval foodplant relationships. Systematics and Biodiversity.
Simonsen, T. J., Zakharov, E. V., Djernaes, M., Cotton, A., Vane-Wright, R. I. & Sperling, F. A. H. (in press): Phylogeny, host plant associations and divergence time of Papilioninae (Lepidoptera: Papilionidae) inferred from morphology and seven genes with special focus on the enigmatic genera Teinopalpus and Meandrusa. Cladistics.
Simonsen, T. J. & Brown, R. L. (2010): Evolution of Host Preferences in Cactus-feeding Pyralidae, p. 20 in Research to Support Integrated Management Systems of Aquatic and Terrestrial Invasive Species, MS Madsen, J.D. et al. (Eds). Geosystems Research Institute GRI#5039, Mississippi State University, Mississippi State.
Simonsen, T. J. (2009): Wing vestiture of the newly described monotrysian Lepidoptera family Andesianidae Davis and Gentili suggests affinity with the putative Tischerioidea -Ditrysia clade (Insecta: Lepidoptera). Studies on Neotropical Fauna and Environment. 44: pp. 109-114.
Simonsen, T. J. & Roe, A. D. (2009): Phylogenetic utility and comparative morphology of the composite scale brushes in male phycitine moths (Lepidoptera, Pyralidae). Zoologischer Anzeiger. 248: pp. 119-136.
Kaaber, S., Kristensen, N. P. & Simonsen, T. J. (2009): Sexual dimorphism and geographical male polymorphism in the ghost moth Hepialus humuli (Lepidoptera: Hepialidae): scale ultrastructure and evolutionary aspects. European Journal of Entomology. 106: pp. 303-313.
Simonsen, T. J., Dombroskie, J. J. & Pohl, G. R. (2009): Melitara Walker (Lepidoptera: Pyralidae) in western Canada: the documentation of M. subumbrella (Dyar) in the Prairie Provinces demonstrates the value of regional collections and species lists. Journal of the Lepidopterists’ Society. 63: pp. 31-36.
Roe, A. D., Weller, S., Baixeras, J., Brown, J. W., Cummings, M., David, D., Kawahara, A. Y., Parr, C. S., Regier, J. C., Rubinoff, D., Simonsen, T. J., Wahlberg, N. & Zwick, A. (2009): Evolutionary framework for Lepidoptera model systems, pp. 1-24 in Genetics and Molecular Biology of Lepidoptera, M Goldsmith and F. Marec (eds.).
Simonsen, T. J. (2008): Phylogeny of the cactus-feeding phycitines and their relatives (Lepidoptera: Pyralidae) based on adult morphology: evaluation of adult character-systems in phycitine systematics and evidence for a single origin of Cactaceae-feeding larvae. Insect systematics and evolution. 39: pp. 303-325
Simonsen, T. J., Dombroskie, J. J. & Lawrie, D. L. (2008): Behavorial observations on the dobsonfly, Corydalis cornutus (Megaloptera: Corylidae) with photographic evidence on the use of the elongate mandibles in the males. The American Entomologist. 54: pp. 167-169.
Simonsen, T. J., Brown, R. L. & Sperling, F. A. H. (2008): Tracing an invasion: Phylogeography of the invasive cactus moth, Cactoblastis cactorum (Berg) (Lepidoptera: Pyralidae) in southeastern USA based on mitochondrial DNA. Annals of the Entomological Society of America. 101: pp. 899-905.
Simonsen, T. J. (2007): Comparative morphology and evolutionary aspects of the reflective under wing scale-pattern in Fritillary butterflies (Nymphalidae: Argynnini). Zoologischer Anzeiger. 246: pp. 1-10.
Simonsen, T. J., Wahlberg, N., Brower, A. W. Z. & de Jong, R. (2006) Molecules, morphology and Fritillaries: a combined approach towards the phylogeny of Argynnini (Lepidoptera: Nymphalidae). Insect Systematics and Evolution. 37: pp. 405-418.
Simonsen, T. J. (2006): Fritillary phylogeny, classification and larval hostplants: reconstructed mainly on the basis of male and female genitalic morphology (Lepidoptera: Nymphalidae: Argynnini). Biological Journal of the Linnean Society. 89: pp. 627-673.
Simonsen, T. J. (2006): The male genitalia segments in Fritillary butterflies: comparative morphology with special reference to the ‘rectal plate’ in Issoria (Lepidoptera: Nymphalidae). European Journal of Entomology. 103. pp. 425-432.
Simonsen, T. J. (2006): Glands, muscles and genitalia. Morphological and phylogenetic implications of histological characters in the male genitalia of Fritillary butterflies (Lepidoptera: Nymphalidae: Argynnini). Zoologica Scripta, 35: pp. 231-241.
Simonsen, T. J. (2005): Boloria phylogeny (Lepidoptera: Nymphalidae): tentatively reconstructed on the basis of male and female genitalic morphology. Systematic Entomology. 30: pp. 653-665.
Simonsen, T. J. & Kristensen, N. P. (2003): Scale length/wing length correlation in Lepidoptera (Insecta). Journal of Natural History. 37: pp. 673-679.
Kristensen, N. P. & Simonsen, T. J. (2003): 'Hairs' and scales. pp. 9-22 in Kristensen, N. P. (ed): Lepidoptera, Moths and Butterflies 2: Morphology, Physiology and Development. Handbook of Zoology vol. IV, part 36. Walter de Gruyter. Berlin/New York.
Simonsen, T. J. (2002): Wing scale covering supports close relationships between Callipielus and Dalaca, austral South American Ghost Moths (Lepidoptera: Hepialidae). Studies on Neotropical Fauna and Environment. 37: pp. 65-69.
Simonsen, T. J. (2001): The wing vestiture of the non-ditrysian Lepidoptera (Insecta). Comparative morphology and phylogenetic implications. Acta Zoologica. 82: 275-298.
Simonsen, T. J. (2001): An electron microscope look at wing scales in "greasy" Lepidoptera. Nota Lepidopterologica. 24: 89-92.
Simonsen, T. J. & Kristensen, N. P. (2001): Agathiphaga wing vestiture revisited: evidence for complex early evolution of lepidopteran scales (Lepidoptera: Agathiphagidae). Insect Systematics and Evolution. 32: 196-175.
Boesgaard, T. M., Jørgensen, A., Schandorff, S., Schiøtt, M. & Simonsen, T. J. (1996): Uegnede målsætninger for monitering i Øresund. Vand & Jord. 6: 234-235. (in Danish)
Karsholt, O., Kristensen, N. P. K., Simonsen, T. J. & Ahola, M. (in prep.): Lepidoptera – moths and butterflies. Book chapter in ‘The Entomofauna of Greenland’ (running title), Jens J. Bocher (ed.), Natural History Museum of Denmark, University of Copenhagen.
Simonsen, T. J. (2007): Five chapters (in all 34 pages): Odonata, Blattodea, Neuoptera, Mecoptera and Butterflies in ‘Insects in Colours’ published in Danish and Swedish by Politikens Forlag Aps. Copenhagen, Denmark.
Simonsen, T. J., Wahlberg, N. & Brower, A. V. Z.: ‘Argynnini’. On the “Tree of Life Web Project”
Simonsen, T. J., Wahlberg, N. & Brower, A. V. Z.: ‘Brenthis’. On the “Tree of Life Web Project”
Simonsen, T. J., Wahlberg, N. & Brower, A. V. Z.: ‘Boloria’. On the “Tree of Life Web Project”
Simonsen, T. J.: ‘Melitara dentata’. Species page on the “E.H. Strickland Entomological Museum, Virtual Museum”
Simonsen, T. J.: ‘Melitara subumbrella’. Species page on the “E.H. Strickland Entomological Museum, Virtual Museum”
Simonsen, T. J.: ‘Zophodia grosulariella’. Species page on the “E.H. Strickland Entomological Museum, Virtual Museum”
Simonsen, T. J.: ‘Acrobasis tricolorella’. Species page on the “E.H. Strickland Entomological Museum, Virtual Museum”
Simonsen, T. J.: ‘Pyla aeneoviridella’. Species page on the “E.H. Strickland Entomological Museum, Virtual Museum”
Simonsen, T. J. (2007): Look out for the gray cactus moth. ALG News. 3(1): 4-5.
Simonsen, T. J. (2004): Insekter og andejagt på kollisionskurs. Bladloppen. 23: 3-4. (in Danish)
Simonsen, T. J. (2004): Dagsommerfugle i tilbagegang – hvad er årsagen og er billedet så entydigt. Bladloppen. 22: 3-4. (in Danish)
Simonsen, T. J. (2004): Perlemorssommerfuglene – et studie i udbredelse. Dyr i Natur og Museum. 2004/2: 10-12. Zoologisk Museum, Københavns Universitet. (in Danish)
Simonsen, T. J. (2003): Sommerfuglenes Vingebeklædning. Naturens Verden. 86(2): 14-19. (in Danish)
Simonsen, T. J. (2000): Sommerfuglestøv under luppen. Dyr i Natur og Museum. 2000/2: 5-8. Zoologisk Museum, Københavns Universitet. (in Danish).