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Exploring cyanobacterial diversity in Antarctica Blog

7 Posts tagged with the cyanobacterial_mat tag
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This year, we went back to Lake Joyce to study the benthic biology in the McMurdo Dry Valleys. The 3D microbial structures that are growing out of the mat are particularly interesting because most of them have a calcite skeleton. This is the only lake in the Dry Valleys where microbial mats have such distinctive calcite skeletons.

 

The calcite skeleton makes these microbialites particularly interesting for geobiology, where modern microbial mats are studied to enable a better interpretation of microbialite fossils from early Earth. 

 

Over the last three weeks we collected samples that will allow us to investigate if the water chemistry, light and sedimentation effect the growth of microbialites in the lake. We also collected mat material to carry out DNA and microscopy analysis to evaluate the role that cyanobacteria, other bacteria and eukaryotes play on the formation of microbialites and their calcite skeleton.

 

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Microscopy image of Phormidium cyanobacterial filaments in Lake Joyce mats. Most of the Phormidium filaments have a strong purple pigmentation though the production of Phycoerythrin for a better utilisation of the limited light that is available in Lake Joyce.

 

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Anne working at the microscope.

 

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Close-up image of microbialites with calcite skeleton covered by thin microbial mat webs .

 

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Microbialite structures with calcite skeleton collected from Lake Joyce by diving.

 

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The team getting ready for a dive to collect microbial mats.

 

The main efforts of the field event led by researchers from UC Davis, California, were to map the distribution of the microbial structures in the lake and to test what the influence of sedimentation is on the microbial structures.

 

The imaging is done by a drop camera that is held on a rope through a hole in the ice. The team installed several traps in the ice that will collect sediment from now until next season.Each hole is individually drilled with a jiffy drill in order to insert the traps and document the microbial mas and microbial structures.

 

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The team drilling a hole in the ice.

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The days are getting shorter in London and the Museum's Ice Rink has opened, but this also means that the days are getting longer in Antarctica with the austral summer approaching. This year, I am very lucky to be invited to join an Antarctic expedition to carry out field work at Lake Joyce, a perennially ice-covered lake in McMurdo Dry Valleys.

 

While I am still packing the cargo and organsing how many woollen and thermal socks I need, half of the team is already there. This year our field work is part of the US Antarctic Program and our main station is McMurdo Station on Ross Island. Here's a webcam with a view over McMurdo.

 

We will continue our work on microbial diversity and the ecology of benthic cyanobacteria-based microbialite structures to better understand why and how microbialite structures are forming in Antarctic lakes.

 

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US Antarctic Program bag tags and travel documents.

 

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Perennially ice-covered Lake Joyce and Taylore Glacier in the Pearse Valley, McMurdo Dry Valleys, Antarctica.

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This afternoon we went for a walk on the Lake Fryxell. The ice is incredible clear in the moat regions, and one can find everywhere cyanobacterial mats frozen into the ice. These cyanobacterial mats were originally from the bottom of the lake, and are called lift-off mats. Microbial mats often drift to the top of the water when they are pushed upwards through the formation of gas bubbles. Although mats are now frozen, it is very likely that many of the cyanobacteria in the mats are still viable.

 

Lake Fryxell with Canada Glacier in the background

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Dried cyanobacterial mats in the ice

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Most of the cyanobacterial mats that we have found were orange pigmented and the macroscopic structure was flaky to cohesive. The orange colour is due to carotenoids which are an protection against UV and oxidative stress.

 

I had a small light micrscope with me in the field and the genus Leptolyngbya dominated the orange mats. Leptolyngbya are filamentous non-branching cyanobacteria belonging to the order Oscillatoriales. They are mostly between 0.5-3 micrometre thick. However, the lower side of the orange layers sometimes had green pigmentation, which besides the Leptolyngbya also had some Phormidium. The genus Phormidium also belong to the order Oscillatoriales, but they are thicker with a width of around 5 micrometres.

 

   Flaky orange-pigmented cyanobacterial mats dominated by Leptolyngbya

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Cohesive orange-pigmented cyanobacterial mats

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green lower side of cyanobacterial mat with Phormidium

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Interestingly, we also found some cyanobacterial mats which were dark purple to black. This colour is due to the UV-screening Scytonemin. We found the genus Schizothrix sp. (Oscillatoriales)  in the mats which is known to produce Scytonemin. We also found several ponds with large accumulations of the genus Nostoc, which belongs to the order Nostocales and has specialist cells called heterocysts for nitrogen-fixation.

 

Cyanobacterial mats with the Scytonemin-producing genus Schizothrix

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Nostoc accumulations in a meltwater pond

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We also found a few ponds with green algae. Green algae biofilms are easy to distinguish from cyanobacteria as green algae are very bright green.

                                                                                              

Green algae

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There are many small ponds and lakes at Cape Evans, similar to Cape Royds . After a quick survey of the ponds, we concentrated on five ponds for sampling. We sampled for morphological, DNA- and RNA-based analysis of the cyanobacterial diversity, as well as nutrient analysis of the water.

 

In one pond we found a pink coloured layer at the bottom of the mats, which is due to the presence of purple bacteria that  are anoxygenic phototrophs.


 



Cyanobacterial mats in Skua Lake

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Large cyanobacterial mat accumulations

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Cyanobacterial mat with a pink layer of purpil bacteria  at the bottom



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Water sampling at a small pond at Cape Evans


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The terrain surounding Cape Royds is covered with many ponds that vary in size, depth, shape and conductivity (salinity). There are also two larger lakes: Blue Lake and Clear lakes that are ice-covered all year. They were named during Shakleton’s expedition because of their blue and clear ice colour.  We were amazed by the variability of pond characteristics and diversity of microbial mats.



Back at the Natural History Museum we will study the cyanobacterial mats using microscopy and DNA-based tools to see if different mat types comprise different cyanobacterial communities.




                                             small pond with lift-off mats at Cape Royds

                                                 

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                                                                 Cyanobacteria-dominated mats

    

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In Lake Hoare the mats are vertically stratified. Each year one layer is formed and they can be used as indicators of growth and environmental conditions just like tree rings. Similar to microbial mats in other lakes the layers have different pigmentations for light capturing and protection.

 

                                                                                Cyanobacterial mats in Lake Hoare

 

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After the divers had brought up mat samples from a depth of ca 10 m, we went back to the lab and identified the diversity using light microscopy. The microbial mats contained different cyanobacteria including the genera Oscillatoria, Phormidium, Leptolyngbya and Nostoc.

 

After returning to the Natural History Museum, we will carry out DNA-based methods to characterise their evolutionary relationship to other Antarctica cyanobacteria.



Anne D Jungblut

Anne D Jungblut

Member since: Sep 2, 2010

I'm Anne Jungblut from the Botany Department. Join me as I head to Antarctica to study cyanobacterial diversity in ice-covered lakes of the Dry Valleys and Ross Island where already scientists on Scott's and Shakleton's expeditions made many discoveries.

View Anne D Jungblut's profile